International Mammalian Genome Society

The 14th International Mouse Genome Conference (2000)

Table of Contents * Genes, Physical Mapping and Sequencing * Gene Identification * Bioinformatics * Common Resources * RIKEN Session * Functional Genomics * Complex Traits * Mutagenesis * Developmental Genetics and Differentiation * Verne Chapman Memorial Lecture I and II

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C. Bioinformatics

C1. Mouse Genome Informatics in the Sequence Era
Paul Szauter, Judith A. Blake, Carol J. Bult, Joel E. Richardson, Jim A. Kadin, Martin Ringwald, Janan T. Eppig and the Mouse Genome Informatics Group

C3. The Mouse Genome Database (MGD) http://www.informatics.jax.org
Lori E. Corbani, Diane Dahmen, Janan T. Eppig and the MGD Staff.

C4. Nomenclature in the 21^st Century: Sequence and the 'Gene'
Lois J. Maltais, Judith A. Blake, Muriel T. Davisson, Janan T. Eppig, and the Mouse Genome Informatics Staff

C5. The Mouse Phenome Project
Molly Bogue, Janan Eppig, and Ken Paigen.

C6. The Mouse Brain Library @ www.mbl.org
Glenn D. Rosen, Alexander G. Williams, J. Anthony Capra, Michael T. Connolly, Brian Cruz, Lu Lu, David C. Airey, Anand Kulkarni, Robert W. Williams

C7. Rat Genome Database: A Platform for Rat, Mouse and Human Comparative Genomics
Peter J. Tonellato, Jian Lu, Deying Chen, Haiping Xia, Zhitao Wang, Anne Kwitek-Black, Dean Pasko, Peter Long, Mary Shimoyama, Jessica Ginster, Janan Eppig, Donna Maglott, Greg Schuler, Fredrik Stahl, Goran Levan, Simon Twigger and Howard Jacob

C8. Enhancements in Map Manager QTX software for mapping quantitative trait loci
Kenneth F. Manly

C9. Microsatellite Database for MSM/Ms and JF1/Ms, inbred strains derived from Mus musculus molossinus
Ikuo Miura, Yoshiaki Kikkawa, Sumiyo Takahama, Shigeharu Wakana, Yukiko Yamazaki, Toshihiko Shiroishi and Hiromichi Yonekawa.

C10. Database System to Support the Whole Work in a Large-Scale Mouse Mutagenesis Program in RIKEN GSC
Hiroshi Masuya, Tomohiro Suzuki, Hiroyuki Iwama, Maki Inoue, Osamu Minowa, Hideaki Toki, Jun Ishii, Yuji Nakai, Yuichiro Kida, Norio Niinaya, Shigeharu Wakana, Tetsuo Noda, Yoichi Gondo and Toshihiko Shiroishi

C11. Comparative Genomics of Mouse ESTs with particular reference to Evolution of Mammalian Genomes
Atsushi Ogura, Tadashi Imanishi, Kazuho Ikeo, and Takashi Gojobori

C12. Large-Scale Submission of Mouse EST Data and their Handling at the DNA Data Bank of Japan (DDBJ)
Satoru Miyazaki, Jun Mashima, Tadashi Mizunuma, Hideaki Sugawara, Yoshio Tateno and Takashi Gojobori

C13. Analysis of Functional Motifs in Mouse Full-Length cDNA Sequences
Hideya Kawaji, Hideo Matsuda, Shinji Kondo, Jun Kawai, Yoshihide Hayashizaki, Akihiro Hashimoto

C14. FANTOM+: Web Interface for the Functional Annotation of Mouse
Hidemasa Bono, Takeya Kasukawa, Katsunaga Sakai, Masaaki Furuno, Toshihisa Okido, Shotaro Kohtsuki, Kiyoshi Yoshida, Yasushi Okazaki and Yoshihide Hayashizaki

C15. READ: Riken Expression Array Database
Hidemasa Bono, Rika Miki, Koji Kadota, Yasushi Okazaki and Yoshihide Hayashizaki

C16. Fluctuation and Identification of Housekeeping Genes on Large-Scale RIKEN Mouse cDNA Microarray
Koji Kadota, Yasushi Okazaki, Hidemasa Bono, Rika Miki, Kentaro Shimizu, Yoshihide Hayashizaki

C17. Computer-Based Methods for a Mouse Full-Length cDNA Project: Database and Real-Time Sequence Clustering for Construction of a Non-Redundant cDNA Library
Hideaki Konno, Yoshifumi Fukunishi, Kazuhiro Shibata, Masayoshi Itoh, Piero Carninci, Yuichi Sugahara and Yoshihide Hayashizaki

C18. Construction of the Riken Mouse Protein-Protein Interaction Database
Rintaro Saito, Kiyoshi Yoshida, Harukazu Suzuki, Yoshihide Hayashizaki

C19. Sequence analysis of alternative splicing patterns in the mouse cDNA clones
Hiromi Kochiwa, Ryosuke Suzuki, Takanori Washio, Akira Shinagawa, Masayoshi Itoh, Kazuhiro Shibata, Carninci Piero, Hideaki Konno, Jun Kawai, Yoshifumi Fukunishi, Yoshihide Hayashizaki and Masaru Tomita.

C20. Correlation between codon usage bias and conservation of 5' untranslated region
Hiroaki Sakai, Yusuke Ohkuma, Chiaki Imamura, Akira Shinagawa, Masayoshi Itoh, Kazuhiro Shibata, Piero Carninci, Hideaki Konno, Jun Kawai, Yoshifumi Fukunishi, Yoshihide Hayashizaki ,and Masaru Tomita.